Package: hhh4contacts 0.13.4

hhh4contacts: Age-Structured Spatio-Temporal Models for Infectious Disease Counts

Meyer and Held (2017) <doi:10.1093/biostatistics/kxw051> present an age-structured spatio-temporal model for infectious disease counts. The approach is illustrated in a case study on norovirus gastroenteritis in Berlin, 2011-2015, by age group, city district and week, using additional contact data from the POLYMOD survey. This package contains the data and code to reproduce the results from the paper, see 'demo("hhh4contacts")'.

Authors:Sebastian Meyer [aut, cre], Leonhard Held [ctb, ths]

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hhh4contacts.pdf |hhh4contacts.html✨
hhh4contacts/json (API)
NEWS

# Install 'hhh4contacts' in R:
install.packages('hhh4contacts', repos = c('https://bastistician.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://codeberg.org/ee-hub/hhh4contacts

Datasets:

On CRAN:

3.28 score 19 scripts 291 downloads 1 mentions 18 exports 14 dependencies

Last updated 5 months agofrom:3eb3f608e0. Checks:8 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKFeb 06 2025
R-4.5-winOKFeb 06 2025
R-4.5-macOKFeb 06 2025
R-4.5-linuxOKFeb 06 2025
R-4.4-winOKFeb 06 2025
R-4.4-macOKFeb 06 2025
R-4.3-winOKFeb 06 2025
R-4.3-macOKFeb 06 2025

Exports:adaptPaddGroups2WFUNaggregateCaggregateCountsArrayC2popcontactmatrixdssAggregateexpandCfitCmake_powerCnoroBEplotCplotHHH4_fitted_groupsplotHHH4_maps_groupsplotHHH4_season_groupsstationarystratumstsplothook_highlight

Dependencies:deldirlatticeMASSMatrixnlmepolyclippolyCubspspatstat.dataspatstat.geomspatstat.univarspatstat.utilssurveillancextable