Package: hhh4contacts 0.13.4.9000

hhh4contacts: Age-Structured Spatio-Temporal Models for Infectious Disease Counts

Meyer and Held (2017) <doi:10.1093/biostatistics/kxw051> present an age-structured spatio-temporal model for infectious disease counts. The approach is illustrated in a case study on norovirus gastroenteritis in Berlin, 2011-2015, by age group, city district and week, using additional contact data from the POLYMOD survey. This package contains the data and code to reproduce the results from the paper, see 'demo("hhh4contacts")'.

Authors:Sebastian Meyer [aut, cre], Leonhard Held [ctb, ths]

hhh4contacts_0.13.4.9000.tar.gz
hhh4contacts_0.13.4.9000.zip(r-4.7-any)hhh4contacts_0.13.4.9000.zip(r-4.6-any)hhh4contacts_0.13.4.9000.zip(r-4.5-any)
hhh4contacts_0.13.4.9000.tgz(r-4.6-any)hhh4contacts_0.13.4.9000.tgz(r-4.5-any)
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hhh4contacts_0.13.4.9000.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
hhh4contacts/json (API)

# Install 'hhh4contacts' in R:
install.packages('hhh4contacts', repos = c('https://bastistician.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://codeberg.org/ee-hub/hhh4contacts

Datasets:

On CRAN:

Conda:

3.25 score 26 scripts 1.4k downloads 1 mentions 18 exports 13 dependencies

Last updated from:6789d6251a. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develOK127
source / vignettesOK157
linux-releaseOK121
macos-releaseOK128
macos-oldrelOK131
windows-develOK85
windows-releaseOK90
windows-oldrelOK85
wasm-releaseOK76

Exports:adaptPaddGroups2WFUNaggregateCaggregateCountsArrayC2popcontactmatrixdssAggregateexpandCfitCmake_powerCnoroBEplotCplotHHH4_fitted_groupsplotHHH4_maps_groupsplotHHH4_season_groupsstationarystratumstsplothook_highlight

Dependencies:deldirlatticeMASSMatrixnlmepolyclippolyCubspspatstat.dataspatstat.geomspatstat.univarspatstat.utilssurveillance